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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015895743.1_cds_XP_016447750.1_42477
CDS Infomation

[gene=LOC107772790] [db_xref=GeneID:107772790] [protein=probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X2] [protein_id=XP_016447750.1] [location=complement(join(1904..2224,2596..2987,3538..3876,3962..4105,4188..4253,5065..5124,5219..5277,5385..5528,5747..5818,5911..6043,6250..6352))] [gbkey=CDS]
Sequence

ATGGTAACTTTAGTACTACTCATTTTCTCAATCTTTCTATTTTGGTTGGCCGTTACTCCT
GCTTCTATGAGTCTTCTTTCACCTAAGGGTGTCAACTATGAAGTGGCAGCACTGATGTCA
ATGAAGAATAAGATGAGAGATGAATACCAAGTGTTAGATGGATGGGATATAAATTCAGTG
GATCCTTGTACTTGGTACATGGTTGGTTGCTCTTCTGAAGGCTTTGTTATTTCTCTTGAA
ATGGCGAGTATGGGGTTATCTGGCTCACTTTCCCCCAGTATTGGGAATTTAACTCATCTT
CGGACACTGTTGTTGCAGAATAATCAGTTATCTGGTCCAATTCCTGCTGAGATTGGGAAG
CTCTCTGAACTGCTGACCCTTGACCTATCCGGTAATCAGTTTGATGGAGAAATTCCTAGG
GCGTTGGGTCGCCTGTTCCGTTTAAGTTACTTGAGGCTTAGCAGGAACAGATTATCTGGA
CTAATTCCTAAACCTGTGGCATCCCTTTCAGGGACTTATCGTTCAATAATCTTAGTGGTC
CTACTCCAAAAATTTTGGCTAAAGATTACAGGAAACAGCTTTCTTTGCTCTGCAATGCCC
ACACAAATTTGTGGGGGCGTGCCAAAACCAGCAAATGAAATGAGTTCAGACAGGAAGACT
AGCAATCATCATCGGTGGGTTGTTTCTGTTATCATTGGGGTCAGTTGCACATTCATAGTT
ACGGTCATGTTGCTTGTTTGTTGGGTGCATTGGTACAGGTCTAATGTCCTCACAGGATAT
GTGCAACACGATTGCGAATTCGCCATTGGCCACCTGAAGAGGTTTTCATTCCGTGAATTG
CAAATTGCCACTGGAAATTTCAGCTCTAAAAATATACTAGGACAAGGTGGATTTGGAGTA
GTCTACAAGGGATACCTTCCCAATAGGACAATAGTGGCTGTCAAAAGATTGAGAGATCCA
AATTTCACTGGAGAAGTGCAGTTCCAAACAGAAGTTGAGATGATAGGCTTGGCTGTGCAT
CGGAACCTTCTACGTTTATATGGATTCTCTATGACTGCAGAGGAAAGATTACTTATTTAC
CCTTATATGCCAAATGGGAGTGTTGCTGATTGCTTGAGAGACAATGGTCGGGATACACCA
TTTTTGGATTGGAGCAAGCGCATGCATATAGCCCTTGGAGCTGCCAGAGGGCTTCTGTAT
TTGCATGAACAGTGTAATCCTAAAATAATTCACAGGGATGTTAAGGCGGCTAATATTCTT
CTTGATGAAAGCTTTGAAGCTGTTGTTGGTGATTTTGGTCTCGCGAAGCTTTTAGACTGT
AGAGATTCGCATGTTACAACAGCAGTTCGTGGTACTATAGGTCATATAGCCCCAGAGTAT
CTATCAACTGGCCAATCATCTGAGAAGACAGATGTCTTTGGATATGGAATACTACTTTTG
GAACTCATTACAGGGCTCAAGTCGCTAGATGCAGGAAATGGTCAGGGTCAGAAAGGAACT
ATTCTTGACCGGGTCCGGAATTTATTTGAGGAAAAGAAAGTGGAAATGCTTGTGGATAGG
GATCTAAAAGGATGTTTTAATACAGAGGAGCTAGAGAAAACAGTTGAAGTGGCTCTACAG
TGCACTCAATCTAACCCCAATAATCGGCCTAAGATGTCAGAGGTTTTGAGAATCCTGGAA
GACATTACGGGACAAATGGGGCATGTGGACGAATCACAAGGTGGAAGCAACATATGCGAA
ACAAGAGCTTTCAGCTTCTCTAGGAATTTTAGCGACATCCATGAAGAATCCTCATTTACC
ATTGAACCAATTGAGCTTTCAGGACCCAGATAA

Peptide Sequence

PEP ID

XP_016447750.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X2 [Nicotiana tabacum]
Sequence

MVTLVLLIFSIFLFWLAVTPASMSLLSPKGVNYEVAALMSMKNKMRDEYQVLDGWDINSV
DPCTWYMVGCSSEGFVISLEMASMGLSGSLSPSIGNLTHLRTLLLQNNQLSGPIPAEIGK
LSELLTLDLSGNQFDGEIPRALGRLFRLSYLRLSRNRLSGLIPKPVASLSGTYRSIILVV
LLQKFWLKITGNSFLCSAMPTQICGGVPKPANEMSSDRKTSNHHRWVVSVIIGVSCTFIV
TVMLLVCWVHWYRSNVLTGYVQHDCEFAIGHLKRFSFRELQIATGNFSSKNILGQGGFGV
VYKGYLPNRTIVAVKRLRDPNFTGEVQFQTEVEMIGLAVHRNLLRLYGFSMTAEERLLIY
PYMPNGSVADCLRDNGRDTPFLDWSKRMHIALGAARGLLYLHEQCNPKIIHRDVKAANIL
LDESFEAVVGDFGLAKLLDCRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGYGILLL
ELITGLKSLDAGNGQGQKGTILDRVRNLFEEKKVEMLVDRDLKGCFNTEELEKTVEVALQ
CTQSNPNNRPKMSEVLRILEDITGQMGHVDESQGGSNICETRAFSFSRNFSDIHEESSFT
IEPIELSGPR

Transcript Sequence

Gene sequence data has not been registered.